####################################### ### Log file for Plant Disease DDRP ### ####################################### BASE DIR: /data/PRISM/ WORKING DIR: /data/PRISM/2026 PARAMETER AND SETTINGS SETUP: getting parameters to use in model Species params: /home/wea/DDRP/spp_params/BROT.params Reading params for species: BROT Fullname: Brown_rot METADATA: creating metadata file for all inputs used in model Done writing metadata file PRISM DATA PROCESSING Sampling every 30 days between 20260101 and 20261011 Sampling also includes today (20261007) 3 days in future (20261010) and 4 days in future (20261011) Finished loading PRISM files for 284 days Creating template file for CONUS Splitting template into 4 tiles Cropping tmax, tmin, tmean, tdmean and ppt tiles for CONUS Done cropping climate data DAILY TIME STEP Starting daily time step Saving raster brick: DDtotal_tile_1.tif - Degree day accum. for all 14 dates Saving raster brick: Lifestage_tile_1.tif - Lifestage for all 14 dates Saving raster brick: NumGen_tile_1.tif - No. of gens for all 14 dates Saving raster brick: StageCount_tile_1.tif - Generation and stage for all 14 dates Saving raster brick: CumDDs_tile_1.tif - Plant disease degree day unit accum. for all 14 dates Saving raster brick: Cum_Inf_Risk_Total_tile_1.tif - Plant disease cum. infection risk for all 14 dates Saving raster brick: Cum_Inf_Risk_1day_tile_1.tif - Cum inf risk 1day Saving raster brick: Cum_Inf_Risk_2day_tile_1.tif - Cum inf risk 2day Saving raster brick: Cum_Inf_Risk_3day_tile_1.tif - Cum inf risk 3day Saving raster brick: Cum_Inf_Risk_4day_tile_1.tif - Cum inf risk 4day Saving raster brick: DDtotal_tile_2.tif - Degree day accum. for all 14 dates Saving raster brick: Lifestage_tile_2.tif - Lifestage for all 14 dates Saving raster brick: DDtotal_tile_4.tif - Degree day accum. for all 14 dates Saving raster brick: DDtotal_tile_3.tif - Degree day accum. for all 14 dates Saving raster brick: NumGen_tile_2.tif - No. of gens for all 14 dates Saving raster brick: Lifestage_tile_4.tif - Lifestage for all 14 dates Saving raster brick: Lifestage_tile_3.tif - Lifestage for all 14 dates Saving raster brick: StageCount_tile_2.tif - Generation and stage for all 14 dates Saving raster brick: NumGen_tile_4.tif - No. of gens for all 14 dates Saving raster brick: NumGen_tile_3.tif - No. of gens for all 14 dates Saving raster brick: CumDDs_tile_2.tif - Plant disease degree day unit accum. for all 14 dates Saving raster brick: StageCount_tile_4.tif - Generation and stage for all 14 dates Saving raster brick: StageCount_tile_3.tif - Generation and stage for all 14 dates Saving raster brick: CumDDs_tile_4.tif - Plant disease degree day unit accum. for all 14 dates Saving raster brick: CumDDs_tile_3.tif - Plant disease degree day unit accum. for all 14 dates Saving raster brick: Cum_Inf_Risk_Total_tile_2.tif - Plant disease cum. infection risk for all 14 dates Saving raster brick: Cum_Inf_Risk_1day_tile_2.tif - Cum inf risk 1day Saving raster brick: Cum_Inf_Risk_2day_tile_2.tif - Cum inf risk 2day Saving raster brick: Cum_Inf_Risk_3day_tile_2.tif - Cum inf risk 3day Saving raster brick: Cum_Inf_Risk_Total_tile_4.tif - Plant disease cum. infection risk for all 14 dates Saving raster brick: Cum_Inf_Risk_4day_tile_2.tif - Cum inf risk 4day Saving raster brick: Cum_Inf_Risk_Total_tile_3.tif - Plant disease cum. infection risk for all 14 dates Saving raster brick: Cum_Inf_Risk_1day_tile_4.tif - Cum inf risk 1day Saving raster brick: Cum_Inf_Risk_2day_tile_4.tif - Cum inf risk 2day Saving raster brick: Cum_Inf_Risk_1day_tile_3.tif - Cum inf risk 1day Saving raster brick: Cum_Inf_Risk_3day_tile_4.tif - Cum inf risk 3day Saving raster brick: Cum_Inf_Risk_2day_tile_3.tif - Cum inf risk 2day Saving raster brick: Cum_Inf_Risk_4day_tile_4.tif - Cum inf risk 4day Saving raster brick: Cum_Inf_Risk_3day_tile_3.tif - Cum inf risk 3day Saving raster brick: Cum_Inf_Risk_4day_tile_3.tif - Cum inf risk 4day Daily loop done (run time = 0.49 min) FINAL ANALYSES AND MAP PRODUCTION Merging tiles for CONUS Merged Cum_Inf_Risk_4day tiles Merged Cum_Inf_Risk_1day tiles Merged Cum_Inf_Risk_2day tiles Merged Cum_Inf_Risk_3day tiles Merged StageCount tiles Merged Cum_Inf_Risk_Total tiles Merged DDtotal tiles Merged CumDDs tiles Merged Lifestage tiles Merged NumGen tiles Done merging and deleting tiles ### SUMMARY MAPS: DDtotal, CumDDs, Total Inf. Risk, 3-day Inf. Risk, 2-day Inf. Risk, Lifestage, and No. of Gens Saving summary map: Misc_output/DDtotal_20260729.png - Number of accum. degree-days on 07/29/2026 Saving summary map: Misc_output/DDtotal_20260130.png - Number of accum. degree-days on 01/30/2026 Saving summary map: Misc_output/DDtotal_20261010.png - Number of accum. degree-days on 10/10/2026 Saving summary map: Misc_output/DDtotal_20260530.png - Number of accum. degree-days on 05/30/2026 Saving summary map: Misc_output/DDtotal_20260927.png - Number of accum. degree-days on 09/27/2026 Saving summary map: Misc_output/DDtotal_20261011.png - Number of accum. degree-days on 10/11/2026 Saving summary map: Misc_output/DDtotal_20260828.png - Number of accum. degree-days on 08/28/2026 Saving summary map: Misc_output/DDtotal_20260629.png - Number of accum. degree-days on 06/29/2026 Saving summary map: Misc_output/DDtotal_20260331.png - Number of accum. degree-days on 03/31/2026 Saving summary map: Misc_output/DDtotal_20261009.png - Number of accum. degree-days on 10/09/2026 Saving summary map: Misc_output/DDtotal_20261007.png - Number of accum. degree-days on 10/07/2026 Saving summary map: Misc_output/DDtotal_20261008.png - Number of accum. degree-days on 10/08/2026 Saving summary map: Misc_output/DDtotal_20260301.png - Number of accum. degree-days on 03/01/2026 Saving summary map: Misc_output/DDtotal_20260430.png - Number of accum. degree-days on 04/30/2026 Saving summary map: Misc_output/Cum_DDs_20260130.png - Number of accum. plant disease degree-days on 01/30/2026 Saving summary map: Misc_output/Cum_DDs_20261010.png - Number of accum. plant disease degree-days on 10/10/2026 Saving summary map: Misc_output/Cum_DDs_20260729.png - Number of accum. plant disease degree-days on 07/29/2026 Saving summary map: Misc_output/Cum_DDs_20261011.png - Number of accum. plant disease degree-days on 10/11/2026 Saving summary map: Misc_output/Cum_DDs_20260927.png - Number of accum. plant disease degree-days on 09/27/2026 Saving summary map: Misc_output/Cum_DDs_20260828.png - Number of accum. plant disease degree-days on 08/28/2026 Saving summary map: Misc_output/Cum_DDs_20260530.png - Number of accum. plant disease degree-days on 05/30/2026 Saving summary map: Misc_output/Cum_DDs_20260301.png - Number of accum. plant disease degree-days on 03/01/2026 Saving summary map: Misc_output/Cum_DDs_20260331.png - Number of accum. plant disease degree-days on 03/31/2026 Saving summary map: Misc_output/Cum_DDs_20261009.png - Number of accum. plant disease degree-days on 10/09/2026 Saving summary map: Misc_output/Cum_DDs_20261008.png - Number of accum. plant disease degree-days on 10/08/2026 Saving summary map: Misc_output/Cum_DDs_20260629.png - Number of accum. plant disease degree-days on 06/29/2026 Saving summary map: Misc_output/Cum_DDs_20260430.png - Number of accum. plant disease degree-days on 04/30/2026 Saving summary map: Misc_output/Cum_DDs_20261007.png - Number of accum. plant disease degree-days on 10/07/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20261010.png - Number of accum. infection risk units on 10/10/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260130.png - Number of accum. infection risk units on 01/30/2026 Saving summary map: Cum_Inf_Risk_Total_20261011.png - Number of accum. infection risk units on 10/11/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260729.png - Number of accum. infection risk units on 07/29/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260301.png - Number of accum. infection risk units on 03/01/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260331.png - Number of accum. infection risk units on 03/31/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260530.png - Number of accum. infection risk units on 05/30/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20261009.png - Number of accum. infection risk units on 10/09/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260828.png - Number of accum. infection risk units on 08/28/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260927.png - Number of accum. infection risk units on 09/27/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260430.png - Number of accum. infection risk units on 04/30/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260629.png - Number of accum. infection risk units on 06/29/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20261008.png - Number of accum. infection risk units on 10/08/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20261007.png - Number of accum. infection risk units on 10/07/2026 Saving summary map: Cum_Inf_Risk_3day_20261010.png - Number of accum. plant disease degree-days 3 days ago to current day Saving summary map: Misc_output/Lifestage_20260130.png - Lifestage on 01/30/2026 Saving summary map: Cum_Inf_Risk_4day_20261011.png - Number of accum. plant disease degree-days 4 days ago to current day Saving summary map: Misc_output/Lifestage_20260729.png - Lifestage on 07/29/2026 Saving summary map: Misc_output/Lifestage_20260301.png - Lifestage on 03/01/2026 Saving summary map: Cum_Inf_Risk_2day_20261009.png - Number of accum. plant disease degree-days 2 days ago to current day Saving summary map: Misc_output/Lifestage_20260530.png - Lifestage on 05/30/2026 Saving summary map: Misc_output/Lifestage_20260331.png - Lifestage on 03/31/2026 Saving summary map: Misc_output/Lifestage_20260828.png - Lifestage on 08/28/2026 Saving summary map: Misc_output/Lifestage_20260927.png - Lifestage on 09/27/2026 Saving summary map: Misc_output/Lifestage_20260430.png - Lifestage on 04/30/2026 Saving summary map: Misc_output/Lifestage_20260629.png - Lifestage on 06/29/2026 Saving summary map: Cum_Inf_Risk_1day_20261008.png - Number of accum. plant disease degree-days 1 days ago to current day Saving summary map: Misc_output/NumGen_20260130.png - Numbers of generations on 01/30/2026 Saving summary map: Misc_output/Lifestage_20261007.png - Lifestage on 10/07/2026 Saving summary map: Misc_output/Lifestage_20261010.png - Lifestage on 10/10/2026 Saving summary map: Misc_output/NumGen_20260530.png - Numbers of generations on 05/30/2026 Saving summary map: Misc_output/Lifestage_20261011.png - Lifestage on 10/11/2026 Saving summary map: Misc_output/NumGen_20260301.png - Numbers of generations on 03/01/2026 Saving summary map: Misc_output/NumGen_20260729.png - Numbers of generations on 07/29/2026 Saving summary map: Misc_output/NumGen_20260828.png - Numbers of generations on 08/28/2026 Saving summary map: Misc_output/NumGen_20260927.png - Numbers of generations on 09/27/2026 Saving summary map: Misc_output/NumGen_20260331.png - Numbers of generations on 03/31/2026 Saving summary map: Misc_output/Lifestage_20261009.png - Lifestage on 10/09/2026 Saving summary map: Misc_output/NumGen_20260629.png - Numbers of generations on 06/29/2026 Saving summary map: Misc_output/NumGen_20260430.png - Numbers of generations on 04/30/2026 Saving summary map: Misc_output/NumGen_20261007.png - Numbers of generations on 10/07/2026 Saving summary map: Misc_output/Lifestage_20261008.png - Lifestage on 10/08/2026 Saving summary map: Misc_output/NumGen_20261010.png - Numbers of generations on 10/10/2026 Saving summary map: Misc_output/NumGen_20261011.png - Numbers of generations on 10/11/2026 Saving summary map: Misc_output/NumGen_20261009.png - Numbers of generations on 10/09/2026 Saving summary map: Misc_output/NumGen_20261008.png - Numbers of generations on 10/08/2026 Saving summary map: Misc_output/StageCount_20260130.png - Stage count on 01/30/2026 Saving summary map: Misc_output/StageCount_20260301.png - Stage count on 03/01/2026 Saving summary map: Misc_output/StageCount_20260331.png - Stage count on 03/31/2026 Saving summary map: Misc_output/StageCount_20260430.png - Stage count on 04/30/2026 Saving summary map: Misc_output/StageCount_20260530.png - Stage count on 05/30/2026 Saving summary map: Misc_output/StageCount_20261008.png - Stage count on 10/08/2026 Saving summary map: Misc_output/StageCount_20261009.png - Stage count on 10/09/2026 Saving summary map: Misc_output/StageCount_20261011.png - Stage count on 10/11/2026 Saving summary map: Misc_output/StageCount_20261010.png - Stage count on 10/10/2026 Saving summary map: Misc_output/StageCount_20260828.png - Stage count on 08/28/2026 Saving summary map: Misc_output/StageCount_20260927.png - Stage count on 09/27/2026 Saving summary map: Misc_output/StageCount_20260629.png - Stage count on 06/29/2026 Saving summary map: Misc_output/StageCount_20261007.png - Stage count on 10/07/2026 Saving summary map: Misc_output/StageCount_20260729.png - Stage count on 07/29/2026 Done with DDtotal, CumDDs, CumDDLW, Lifesetage, NumGen, and Generation and Stage maps ### Done w/ processing of daily loop results ### Run time for analyses and map production = 1.72 min Renamed all final PNG files to include BROT in file name MODEL RUN DONE Run time for entire model = 3.31 min